Framework thesis topics for the academic year 2026/2027

Important note: It is common that the online application system opens later for doctoral programmes. The reason is that it usually takes some time before the list of available dissertation topics and supervisors is finalized. The list of available topics is expected to be published during January or February 2026.

In the meantime, you can browse the relevant department's website and contact potential supervisor directly.

Biology, Ecology and Environmental Sciences

Study programme Botany

Study programme Ecology

Study programme Experimental Biology

Mass spectrometry Imaging-based hormonomics analysis for plant stress  studies
Supervisor: Mgr. Karel Doležal, Dr., DSc.

Developing mass spectrometry imaging-based hormonomics methods for  plant tissue imaging
Supervisor: Mgr. Karel Doležal, Dr., DSc.

Hormopriming as a potential tool for regulating plant stress responses
Školitel: RNDr. Ondřej Plíhal, PhD.

Study programme Molecular and Cell Biology

Protein-protein interactions as target for pharmacological modulation of aryl hydrocarbon receptor AhR signaling pathway
Supervisor: prof. RNDr. Zdeněk Dvořák DrSc., Ph.D.

Function of plant RAD60 in SUMO-dependent genome stability signaling
Supervisor: Mgr. Eva Dvořák Tomaštíková, Ph.D.

Genetic and developmental consequences of ploidy transitions in barley seeds
Supervisor: Ing. Anna Katarzyna Nowicka, Ph.D.

Study programme Zoology

Physics

Study programme Applied Physics

Study programme Biophysics

Study programme Nanotechnology

Study programme Optics and Optoelectronics

Chemistry

Study programme Analytical Chemistry

Study programme Inorganic Chemistry

Study programme Biochemistry

Study programme Physical Chemistry

Study programme Organic and Bioorganic Chemistry

Study programme Nanomaterial Chemistry

Mathematics

Study programme Algebra and Geometry

Study programme Applied Mathematics

Study programme Mathematical Analysis

Analysis of equilibria
Supervisor: Prof. RNDr. dr hab. Jan Andres CSC.,DSc.
Nonlinear and multivalued analysis of equilibria will be considered to dynamical systems and differential inclusions. Standard well known equilibria are, for instance those of Nash in the frame of the game theory. Using the fractional and topological methods (degree arguments, or so), the existence, localization, multiplicity and stability results will be of an interest.

Multivalued boundary value problems
Supervisor: Prof. RNDr. dr hab. Jan Andres CSC.,DSc.
Boundary value problems for the second-order differential inclusions with Neumann boundary conditions will be under consideration. The applied technique will be based on a combination of topological (e.g. degree) arguments and Lyapunov-type bounding functions. The existence, localization and multiplicity results will be of an interest.

Almost-periodic sequences
Supervisor: Prof. RNDr. dr hab. Jan Andres CSC.,DSc.
The hierarchy of almost-periodic sequences will be investigated in various metrics. The existence of almost-periodic solutions will be then considered. In the particular case of limit-periodic solutions, the difference equations will be preferably explored in the absence of global lipschitzianity imposed on the right-hand sides.

Earth Sciences

Study programme Geoinformatics and Cartography

Study programme Geological Sciences

Study programme Environmental and Development Studies

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